Publications – old

Gross, F. (2023). Do Single-cell Experiments Challenge the Concept of Cell Type? Organisms. Journal of Biological Sciences, 6(2).
Horwitz, A. V., & Wakefield, J. C. (2023). Two Sides of Depression: Medical & Social. Daedalus, 152(4), 212–227.
Hazelwood, C. (2023). An Emerging Dilemma for Reciprocal Causation. Philosophy of Science, 1–43.
Zach, M. (2023). On the Relationship between Asymptomatic Infections and Diseases. Philosophy of Medicine, 4(1).
Kostić, D., & Halffman, W. (2023). Mapping explanatory language in neuroscience. Synthese, 202(4), 112.
Zheng, Q., & Daskalov, A. (2023). Microbial gasdermins: More than a billion years of pyroptotic-like cell death. Seminars in Immunology, 69, 101813.
Dooren, T. van, Price, C. J., Banks, P. B., Berger-Tal, O., Chrulew, M., Johnson, J., Lajeunesse, G., Lynch, K. E., McArthur, C., Parker, F. C. G., Oakey, M., Pitcher, B. J., Clair, C. C. S., Ward-Fear, G., Widin, S., Wong, B. B. M., & Blumstein, D. T. (2023). The ethics of intervening in animal behaviour for conservation. Trends in Ecology & Evolution, 38(9), 822–830.
DiFrisco, J., Wagner, G. P., & Love, A. C. (2023). Reframing research on evolutionary novelty and co-option: Character identity mechanisms versus deep homology. Seminars in Cell & Developmental Biology, 145, 3–12.
Gilbert, S. F. (2023). Shells, Gills, and GonadsOn the Remarkable Persistence of Oysters in the Chesapeake Bay. Historical Studies in the Natural Sciences, 53(3), 221–241.
Daly, T. (2023). Philosophers of Medicine Should Write More Letters for Medical Journals. Philosophy of Medicine, 4, 1–3.
Pavani, M., Chiroli, E., Cancrini, C., Gross, F., Bonaiuti, P., Villa, S., Giavazzi, F., Matafora, V., Bachi, A., Fava, L. L., Lischetti, T., & Ciliberto, A. (2023). Triap1 upregulation promotes escape from mitotic-slippage-induced G1 arrest. Cell Reports, 42(3).
Carrieri, D., Peccatori, F. A., & Boniolo, G. (2023). The Oncohumanities training programme: Fostering a deeper engagement and integration of oncology and humanities to tackle the pressing and complex challenges of cancer care.
Kagan, B. J., Razi, A., Bhat, A., Kitchen, A. C., Tran, N. T., Habibollahi, F., Khajehnejad, M., Parker, B. J., Rollo, B., & Friston, K. J. (2023). Scientific communication and the semantics of sentience. Neuron, 111(5), 606–607.
Balci, F., Hamed, S. B., Boraud, T., Bouret, S., Brochier, T., Brun, C., Cohen, J. Y., Coutureau, E., Deffains, M., Doyère, V., Gregoriou, G. G., Heimel, J. A., Kilavik, B. E., Lee, D., Leuthardt, E. C., Mainen, Z. F., Mathis, M., Monosov, I. E., Naudé, J., … Zimmermann, J. (2023). A response to claims of emergent intelligence and sentience in a dish. Neuron, 111(5), 604–605.
Levenstein, D., Alvarez, V. A., Amarasingham, A., Azab, H., Chen, Z. S., Gerkin, R. C., Hasenstaub, A., Iyer, R., Jolivet, R. B., Marzen, S., Monaco, J. D., Prinz, A. A., Quraishi, S., Santamaria, F., Shivkumar, S., Singh, M. F., Traub, R., Nadim, F., Rotstein, H. G., & Redish, A. D. (2023). On the Role of Theory and Modeling in Neuroscience. Journal of Neuroscience, 43(7), 1074–1088.
Zach, M., & Greslehner, G. P. (2023). Understanding immunity: an alternative framework beyond defense and strength. Biology & Philosophy, 38(1), 7.
Williamson, H. F., & Leonelli, S. (Eds.). (2023). Towards Responsible Plant Data Linkage: Data Challenges for Agricultural Research and Development. Springer International Publishing.
Du Crest, A., Valković, M., Ariew, A., Desmond, H., Huneman, P., & Reydon, T. A. C. (Eds.). (2023). Evolutionary Thinking Across Disciplines: Problems and Perspectives in Generalized Darwinism (Vol. 478). Springer International Publishing.
Hazelwood, C. (2023). Reciprocal Causation and Biological Practice.
DiFrisco, J., Love, A. C., & Wagner, G. P. (2023). The hierarchical basis of serial homology and evolutionary novelty. Journal of Morphology, 284(1), e21531.
Huneman, P. (2023). Death: Perspectives from the Philosophy of Biology. Springer International Publishing.
Wakefield, J. C. (2023). The promise of evolutionary psychiatry. World Psychiatry, 22(2), 173–174.
Méthot, P.-O. (Ed.). (2023). Philosophy, History and Biology: Essays in Honour of Jean Gayon (Vol. 30). Springer International Publishing.
Pradeu, T., Daignan-Fornier, B., Ewald, A., Germain, P.-L., Okasha, S., Plutynski, A., Benzekry, S., Bertolaso, M., Bissell, M., Brown, J. S., Chin-Yee, B., Chin-Yee, I., Clevers, H., Cognet, L., Darrason, M., Farge, E., Feunteun, J., Galon, J., Giroux, E., … Laplane, L. (2023). Reuniting philosophy and science to advance cancer research. Biological Reviews, 98(5), 1668–1686.
Bourrat, P., Godsoe, W., Pillai, P., Gouhier, T. C., Ulrich, W., Gotelli, N. J., & van Veelen, M. (2023). What is the price of using the Price equation in ecology? Oikos, 2023(8), e10024.
Clarke, B. (2022). “Margulis, Autopoiesis, and Sympoiesis.” In Symbionts: Contemporary Artists and the Biosphere (pp. 63–77). MIT Press.
Leonelli, S. (2022). Process-Sensitive Naming: Trait Descriptors and the Shifting Semantics of Plant (Data) Science. Philosophy, Theory, and Practice in Biology, 14.
Gilbert, S. (2022). Pseudo-embryology and Personhood: How embryological pseudoscience helps structure the American abortion debate.
Williamson, H. F., & Leonelli, S. (2022). Accelerating agriculture: Data-intensive plant breeding and the use of genetic gain as an indicator for agricultural research and development. Studies in History and Philosophy of Science, 95, 167–176.
Wakefield, J. C. (2022). Freud’s Argument for the Oedipus Complex: A Philosophy of Science Analysis of the Case of Little Hans. Routledge.
Barack, D. L., Miller, E. K., Moore, C. I., Packer, A. M., Pessoa, L., Ross, L. N., & Rust, N. C. (2022). A call for more clarity around causality in neuroscience. Trends in Neurosciences, 45(9), 654–655.
Calvo, P., & Lawrence, N. (2022). Planta Sapiens: Unmasking Plant Intelligence. Hachette UK.
Gilbert, S. F., & Hadfield, M. G. (2022). Symbiosis of disciplines: how can developmental biologists join conservationists in sustaining and restoring earth’s biodiversity? Development, 149(13), dev199960.
Torri, A., Jaeger, J., Pradeu, T., & Saleh, M.-C. (2022). The origin of RNA interference: Adaptive or neutral evolution? PLOS Biology, 20(6), e3001715.
Ratti, E., & Germain, P.-L. (2022). A relic of design: against proper functions in biology. Biology & Philosophy, 37(4), 27.
Zach, M. (2022). A Complementary Account of Scientific Modelling: Modelling Mechanisms in Cancer Immunology. The British Journal for the Philosophy of Science.
Solomon, M., Foderà, V., Langkilde, A. E., Elliott, P., Tagliavini, F., Forsyth, T., Klementieva, O., & Bellotti, V. (2022). Recommendations for addressing the translational gap between experimental and clinical research on amyloid diseases. Journal of Translational Medicine, 20(1), 213.
Love, A. C., Grabowski, M., Houle, D., Liow, L. H., Porto, A., Tsuboi, M., Voje, K. L., & Hunt, G. (2022). Evolvability in the fossil record. Paleobiology, 48(2), 186–209.
Sepich-Poore, G. D., Guccione, C., Laplane, L., Pradeu, T., Curtius, K., & Knight, R. (2022). Cancer’s second genome: Microbial cancer diagnostics and redefining clonal evolution as a multispecies process: Humans and their tumors are not aseptic, and the multispecies nature of cancer modulates clinical care and clonal evolution: Humans and their tumors are not aseptic, and the multispecies nature of cancer modulates clinical care and clonal evolution. BioEssays: News and Reviews in Molecular, Cellular and Developmental Biology, 44(5), e2100252.
Alexa, A., Sok, P., Gross, F., Albert, K., Kobori, E., Póti, Á. L., Gógl, G., Bento, I., Kuang, E., Taylor, S. S., Zhu, F., Ciliberto, A., & Reményi, A. (2022). A non-catalytic herpesviral protein reconfigures ERK-RSK signaling by targeting kinase docking systems in the host. Nature Communications, 13(1), 472.
Khalifa, K., Islam, F., Gamboa, J. P., Wilkenfeld, D. A., & Kostić, D. (2022). Integrating Philosophy of Understanding With the Cognitive Sciences. Frontiers in Systems Neuroscience, 16.
Pavličev, M., & Wagner, G. P. (2022). The value of broad taxonomic comparisons in evolutionary medicine: Disease is not a trait but a state of a trait! MedComm, 3(4), e174.
Solomon, M. (2022). A Pragmatic Approach to Diagnostic Categorization. In M. D. Lockshin, M. K. Crow, & M. Barbhaiya (Eds.), Diagnoses Without Names: Challenges for Medical Care, Research, and Policy (pp. 11–17). Springer International Publishing.
Daëron, M. (2022). The immune system as a system of relations. Frontiers in Immunology, 13.
Barwich, A.-S., & Lloyd, E. A. (2022). More than meets the AI: The possibilities and limits of machine learning in olfaction. Frontiers in Neuroscience, 16.
Barwich, A.-S., & Smith, B. C. (2022). From Molecules to Perception: Philosophical Investigations of Smell. Philosophy Compass, 17(11), e12883.
André, J.-B., Cozic, M., De Monte, S., Gayon, J., Huneman, P., Martens, J., & Walliser, B. (2022). From Evolutionary Biology to Economics and Back: Parallels and Crossings between Economics and Evolution (Vol. 28). Springer International Publishing.
Bickle, J., Craver, C. F., & Barwich, A.-S. (2021). The Tools of Neuroscience Experiment: Philosophical and Scientific Perspectives. Routledge.
Khelfaoui, M., Gingras, Y., Lemoine, M., & Pradeu, T. (2021). The visibility of philosophy of science in the sciences, 1980–2018. Synthese, 199(3), 6219–6249.
Kostić, D., & Khalifa, K. (2021). The directionality of topological explanations. Synthese, 199(5), 14143–14165.